Laboratory reports of respiratory infections made to PHE from PHE and NHS laboratories in England and Wales: weeks 44 to 48, 2018
Updated 4 January 2019
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Data are recorded by week of report, but include only specimens taken in the last 8 weeks (meaning recent specimens).
Table 1. Reports of influenza infection made to PHE Colindale, by week of report
| Week | Week 44 | Week 45 | Week 46 | Week 47 | Week 48 | Total |
|---|---|---|---|---|---|---|
| Week ending | 4/11/2018 | 11/11/2018 | 18/11/2018 | 25/11/2018 | 2/12/2018 | 听 |
| Influenza A | 49 | 69 | 98 | 96 | 164 | 476 |
| Isolation | 2 | 1 | 4 | 4 | 2 | 13 |
| DIF | 鈥� | 鈥� | 3 | 3 | 1 | 7 |
| PCR | 44 | 66 | 85 | 83 | 158 | 436 |
| Other 鈥� | 3 | 2 | 6 | 6 | 3 | 20 |
| Influenza B | 11 | 10 | 9 | 11 | 11 | 52 |
| Isolation | 2 | 鈥� | 1 | 鈥� | 1 | 4 |
| DIF * | 鈥� | 鈥� | 鈥� | 1 | 鈥� | 1 |
| PCR | 9 | 10 | 8 | 10 | 10 | 47 |
| Other 鈥� | 鈥� | 鈥� | 鈥� | 鈥� | 鈥� | 0 |
Table 2. Respiratory viral detections by any method (culture, direct immunofluorescence, PCR, four-fold rise in paired sera, single high serology titre, genomic, electron microscopy, other method, other method unknown), by week of report
| Week | Week 44 | Week 45 | Week 46 | Week 47 | Week 48 | Total |
|---|---|---|---|---|---|---|
| Week ending | 4/11/2018 | 11/11/2018 | 18/11/2018 | 25/11/2018 | 2/12/2018 | 听 |
| Adenovirus* | 55 | 62 | 105 | 73 | 85 | 380 |
| Coronavirus | 8 | 29 | 30 | 27 | 36 | 130 |
| 笔补谤补颈苍蹿濒耻别苍锄补鈥� | 105 | 87 | 112 | 79 | 101 | 484 |
| Rhinovirus | 332 | 314 | 473 | 367 | 461 | 1947 |
| RSV | 500 | 690 | 1006 | 1090 | 1181 | 4467 |
* Respiratory samples only.
鈥� Includes parainfluenza types 1, 2, 3, 4 and untyped.
Table 3. Respiratory viral detections by age group: weeks 44 to 48, 2018
| Age group (years) | <1 year | 1-4 years | 5-14 years | 15-44 years | 45-64 years | 鈮�65 years | Unknown | Total |
|---|---|---|---|---|---|---|---|---|
| Adenovirus * | 84 | 168 | 26 | 56 | 29 | 17 | 鈥� | 380 |
| Coronavirus | 21 | 21 | 7 | 27 | 24 | 30 | 鈥� | 130 |
| Influenza A | 16 | 66 | 46 | 155 | 142 | 97 | 1 | 523 |
| Influenza B | 1 | 29 | 4 | 8 | 12 | 10 | 鈥� | 64 |
| Parainfluenza 鈥� | 99 | 112 | 38 | 64 | 68 | 103 | 鈥� | 484 |
| Respiratory syncytial virus | 2530 | 971 | 120 | 188 | 223 | 435 | 鈥� | 4467 |
| Rhinovirus | 545 | 407 | 120 | 283 | 233 | 358 | 1 | 1947 |
* Respiratory samples only.
鈥� Includes parainfluenza types 1, 2, 3, 4 and untyped.
Table 4. Laboratory reports of infections associated with atypical pneumonia, by week of report
| Week | Week 44 | Week 45 | Week 46 | Week 47 | Week 48 | Total |
|---|---|---|---|---|---|---|
| Week ending | 4/11/2018 | 11/11/2018 | 18/11/2018 | 25/11/2018 | 2/12/2018 | 听 |
| Coxiella burnettii | 2 | 鈥� | 2 | 1 | 鈥� | 5 |
| Respiratory Chlamydia sp.* | 21 | 15 | 14 | 7 | 8 | 65 |
| Mycoplasma pneumoniae | 9 | 9 | 14 | 9 | 3 | 44 |
* Includes Chlamydia Psittaci, Chlamydia Pneumoniae, and Chlamydia sp detected from blood, serum, and respiratory specimens.
Legionnaires Disease cases in England and Wales
Monthly reports of Legionnaires鈥� disease are available at Legionnaires鈥� disease monthly surveillance reports: 2018.
Weekly national Influenza reports
The latest weekly national influenza report can be found at: Weekly national flu reports: 2017 to 2018 season.
This report was published in Health Protection Report volume 12 issue 44.