Laboratory reports of respiratory infections made to PHE from PHE and NHS laboratories in England and Wales: weeks 40 to 43, 2018
Updated 4 January 2019
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Data are recorded by week of report, but include only specimens taken in the last 8 weeks (recent specimens).
Table 1. Reports of influenza infection made to PHE Colindale, by week of report
| Week | Week 40 | Week 41 | Week 42 | Week 43 | Total |
|---|---|---|---|---|---|
| Week ending | 7/10/2018 | 14/10/2018 | 21/10/2018 | 28/10/2018 | 听 |
| Influenza A | 16 | 23 | 17 | 34 | 90 |
| Isolation | 鈥� | 3 | 鈥� | 1 | 4 |
| DIF * | 鈥� | 1 | 1 | 鈥� | 2 |
| PCR | 15 | 17 | 15 | 30 | 77 |
| Other 鈥� | 1 | 2 | 1 | 3 | 7 |
| Influenza B | 8 | 鈥� | 6 | 8 | 22 |
| Isolation | 鈥� | 鈥� | 鈥� | 鈥� | 0 |
| DIF * | 1 | 鈥� | 1 | 鈥� | 2 |
| PCR | 6 | 鈥� | 5 | 8 | 19 |
| Other 鈥� | 1 | 鈥� | 鈥� | 鈥� | 1 |
* DIF = Direct Immunofluorescence.
鈥� Other = 鈥楢ntibody detection - single high titre鈥� or 鈥楳ethod not specified鈥�.
Table 2. Respiratory viral detections by any method (culture, direct immunofluorescence, PCR, four-fold rise in paired sera, single high serology titre, genomic, electron microscopy, other method, other method unknown), by week of report
| Week | Week 40 | Week 41 | Week 42 | Week 43 | Total |
|---|---|---|---|---|---|
| Week ending | 7/10/2018 | 14/10/2018 | 21/10/2018 | 28/10/2018 | 听 |
| Adenovirus* | 52 | 48 | 41 | 55 | 196 |
| Coronavirus | 9 | 7 | 9 | 8 | 33 |
| 笔补谤补颈苍蹿濒耻别苍锄补鈥� | 77 | 66 | 90 | 71 | 304 |
| Rhinovirus | 386 | 340 | 362 | 329 | 1417 |
| RSV | 108 | 120 | 232 | 325 | 785 |
* Respiratory samples only.
鈥� Includes parainfluenza types 1, 2, 3, 4 and untyped.
Table 3. Respiratory viral detections by age group: weeks 40 to 43, 2018
| Age group (years) | <1 year | 1-4 years | 5-14 years | 15-44 years | 45-64 years | 鈮�65 years | Unknown | Total |
|---|---|---|---|---|---|---|---|---|
| Adenovirus * | 38 | 79 | 10 | 38 | 19 | 12 | 鈥� | 196 |
| Coronavirus | 3 | 3 | 2 | 11 | 9 | 5 | 鈥� | 33 |
| Influenza A | 4 | 7 | 2 | 31 | 25 | 25 | 1 | 95 |
| Influenza B | 鈥� | 5 | 2 | 5 | 3 | 5 | 1 | 21 |
| Parainfluenza 鈥� | 64 | 65 | 23 | 40 | 45 | 67 | 鈥� | 304 |
| Respiratory syncytial virus | 467 | 205 | 9 | 27 | 28 | 48 | 1 | 785 |
| Rhinovirus | 328 | 221 | 110 | 319 | 191 | 247 | 1 | 1417 |
* Respiratory samples only.
鈥� Includes parainfluenza types 1, 2, 3, 4 and untyped.
Table 4. Laboratory reports of infections associated with atypical pneumonia, by week of report
| Week | Week 40 | Week 41 | Week 42 | Week 43 | Total |
|---|---|---|---|---|---|
| Week ending | 7/10/2018 | 14/10/2018 | 21/10/2018 | 28/10/2018 | 听 |
| Coxiella burnettii | 鈥� | 2 | 鈥� | 鈥� | 2 |
| Respiratory Chlamydia sp.* | 10 | 15 | 6 | 鈥� | 31 |
| Mycoplasma pneumoniae | 10 | 10 | 4 | 6 | 30 |
* Includes Chlamydia psittaci, Chlamydia pneumoniae, and Chlamydia sp detected from blood, serum, and respiratory specimens.
Legionnaires Disease cases in England and Wales
Latest reports of Legionnaires鈥� Disease are published at Legionnaires鈥� disease monthly surveillance reports: 2018.
Routine national (UK) influenza reports
UK influenza reports are published (by season) at Weekly National Flu Reports collection.
This report was published in Health Protection Report volume 12 issue 39.