Laboratory reports of respiratory infections made to PHE from PHE and NHS laboratories in England and Wales: weeks 36 to 39, 2018
Updated 4 January 2019
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Data are recorded by week of report, but include only specimens taken in the last 8 weeks (recent specimens).
Table 1. Reports of influenza infection made to PHE Colindale, by week of report
| Week | Week 36 | Week 37 | Week 38 | Week 39 | Total |
|---|---|---|---|---|---|
| Week ending | 9/9/2018 | 16/9/2018 | 23/9/2018 | 30/9/2018 | 听 |
| Influenza A | 28 | 34 | 13 | 12 | 87 |
| Isolation | 3 | 2 | 鈥� | 1 | 6 |
| DIF * | 鈥� | 1 | 鈥� | 鈥� | 1 |
| PCR | 25 | 29 | 13 | 9 | 76 |
| Other 鈥� | 鈥� | 2 | 鈥� | 2 | 4 |
| Influenza B | 8 | 3 | 7 | 3 | 21 |
| Isolation | 1 | 鈥� | 鈥� | 鈥� | 1 |
| DIF * | 鈥� | 鈥� | 1 | 鈥� | 1 |
| PCR | 7 | 3 | 6 | 3 | 19 |
| Other 鈥� | 鈥� | 鈥� | 鈥� | 鈥� | 0 |
* DIF = Direct Immunofluorescence.
鈥� Other = 鈥楢ntibody detection - single high titre鈥� or 鈥楳ethod not specified鈥�.
Table 2. Respiratory viral detections by any method (culture, direct immunofluorescence, PCR, four-fold rise in paired sera, single high serology titre, genomic, electron microscopy, other method, other method unknown), by week of report
| Week | Week 36 | Week 37 | Week 38 | Week 39 | Total |
|---|---|---|---|---|---|
| Week ending | 9/9/2018 | 16/9/2018 | 23/9/2018 | 30/9/2018 | 听 |
| Adenovirus* | 29 | 26 | 24 | 32 | 111 |
| Coronavirus | 6 | 4 | 4 | 6 | 20 |
| 笔补谤补颈苍蹿濒耻别苍锄补鈥� | 45 | 59 | 44 | 64 | 212 |
| Rhinovirus | 182 | 209 | 317 | 351 | 1059 |
| RSV | 39 | 38 | 35 | 50 | 162 |
* Respiratory samples only.
鈥� Includes parainfluenza types 1, 2, 3, 4 and untyped.
Table 3. Respiratory viral detections by age group: weeks 36 to 39, 2018
| Age group (years) | <1 year | 1-4 years | 5-14 years | 15-44 years | 45-64 years | 鈮�65 years | Unknown | Total |
|---|---|---|---|---|---|---|---|---|
| Adenovirus * | 22 | 29 | 9 | 31 | 12 | 8 | 111 | 听 |
| Coronavirus | 2 | 2 | 1 | 4 | 7 | 4 | 20 | 听 |
| Influenza A | 1 | 6 | 5 | 40 | 19 | 14 | 85 | 听 |
| Influenza B | 鈥� | 2 | 4 | 6 | 5 | 5 | 22 | 听 |
| Parainfluenza 鈥� | 32 | 42 | 13 | 38 | 47 | 40 | 212 | 听 |
| Respiratory syncytial virus | 79 | 57 | 2 | 7 | 10 | 7 | 162 | 听 |
| Rhinovirus | 238 | 200 | 107 | 208 | 156 | 150 | 1059 | 听 |
* Respiratory samples only.
鈥� Includes parainfluenza types 1, 2, 3, 4 and untyped.
Table 4. Laboratory reports of infections associated with atypical pneumonia, by week of report
| Week | Week 36 | Week 37 | Week 38 | Week 39 | Total |
|---|---|---|---|---|---|
| Week ending | 9/9/2018 | 16/9/2018 | 23/9/2018 | 30/9/2018 | 听 |
| Coxiella burnettii | 1 | 鈥� | 鈥� | 鈥� | 1 |
| Respiratory Chlamydia sp.* | 5 | 16 | 4 | 2 | 27 |
| Mycoplasma pneumoniae | 4 | 5 | 4 | 3 | 16 |
* Includes Chlamydia psittaci, Chlamydia pneumoniae, and Chlamydia sp detected from blood, serum, and respiratory specimens.
Legionnaires Disease cases in England and Wales
Latest reports of Legionnaires鈥� Disease are published at Legionnaires鈥� disease monthly surveillance reports: 2018.
Routine national (UK) influenza reports
UK influenza reports are published (by season) at Weekly National Flu Reports collection.
This report was published in Health Protection Report volume 12 issue 36.